merk/src/utilities.c

#include "utilities.h"

List* list_new(size_t item_size) {
    List* list = calloc(1, sizeof(List));
    if (!list) { perror("ERROR: memory allocation in new_list failed!"); return NULL; }

    list->items = calloc(LIST_INIT_CAPACITY, item_size);
    if (!list->items) { perror("ERROR: memory allocation in new_list failed!"); free(list); return NULL; }

    list->len = 0;
    list->capacity = LIST_INIT_CAPACITY;
    list->item_size = item_size;
    return list;
}

int list_push(List* list, void* item) {
    if (!list || !item) return 0;

    if (list->len == list->capacity) {
        size_t new_capacity = list->capacity * 2;
        void* new_items = realloc(list->items, new_capacity * list->item_size);
        if (!new_items) { perror("ERROR: memory reallocation failed in list_push!"); return 0; }

        list->items = new_items;
        list->capacity = new_capacity;
    }

    char* dest = (char*)list->items + (list->len * list->item_size);
    memcpy(dest, item, list->item_size);
    list->len++;

    return 1;
}

int list_remove(List* list, const void* key, int (*compare)(const void*, const void*)) {
    if (!list || !key || !compare || list->len == 0) {
        return 0;
    }

    for (size_t i = 0; i < list->len; i++) {
        char* current_item = (char*)list->items + (i * list->item_size);

        if (compare(key, current_item) == 0) {
            for (size_t j = i; j < list->len - 1; j++) {
                char* dest = (char*)list->items + (j * list->item_size);
                char* src = (char*)list->items + ((j + 1) * list->item_size);
                memcpy(dest, src, list->item_size);
            }

            list->len--;
            return 1;
        }
    }

    return 0;
}

void list_free(List* buffer) {
    if (buffer) {
        for (size_t i = 0; i < buffer->len; i++) {
            free(buffer->items[i]);
        }
        free(buffer->items);
        free(buffer);
    }
}

void* binary_search(const void* key, const void* base, size_t num_elements, size_t element_size, int (*compare)(const void*, const void*)) {
    if (!key || !base || !compare || num_elements == 0) {
        return NULL;
    }

    size_t left = 0;
    size_t right = num_elements - 1;

    while (left <= right) {
        size_t mid = left + (right - left) / 2;

        const char* mid_element = (const char*)base + (mid * element_size);

        int cmp = compare(key, mid_element);
 
        if (cmp == 0) {
            return (void*)mid_element;
        }
        else if (cmp < 0) {
            if (mid == 0) break;
            right = mid - 1;
        }
        else {
            left = mid + 1;
        }
    }

    return NULL;
}

void* list_binary_search(List* list, const void* key, int (*compare)(const void*, const void*)) {
    if (!list || !key || !compare) {
        return NULL;
    }

    return binary_search(key, list->items, list->len, list->item_size, compare);
}

StringBuffer* string_buffer_new() {
    return list_new(sizeof(char*));
}

int string_buffer_push(StringBuffer* buffer, char* path) {
    char* path_copy = strdup(path);
    if (!path_copy) {
        perror("ERROR: strdup failed in string_buffer_push!");
        return 0;
    }
    return list_push(buffer, &path_copy);
}

int compare_strings(const void* a, const void* b) {
    const char* s1 = *(const char**)a;
    const char* s2 = *(const char**)b;
    return strcmp(s1,s2);
}

void string_buffer_sort(StringBuffer* buffer) {
    if (!buffer || buffer->len <= 1) {
        return;
    }

    qsort(buffer->items, buffer->len, sizeof(char*), compare_strings);
}

char* string_buffer_search(StringBuffer* buffer, char* path) {
    if (!buffer || !path) return NULL;
    return (char*)list_binary_search(buffer, path, compare_strings);
}

FileInfoBuffer* file_info_buffer_new() {
    return list_new(sizeof(FileInfo));
}

int file_info_buffer_push(FileInfoBuffer* buffer, FileInfo info) {
    return list_push(buffer, &info);
}

void file_info_buffer_free(List* buffer) {
    if (buffer) {
        free(buffer->items);
        free(buffer);
    }
}

int compare_file_info(const void* a, const void* b) {
    const FileInfo* info1 = (const FileInfo*)a;
    const FileInfo* info2 = (const FileInfo*)b;

    return strcmp(info1->name, info2->name);
}

void file_info_buffer_sort(FileInfoBuffer* buffer) {
    if (!buffer || buffer->len <= 1) {
        return;
    }

    qsort(buffer->items, buffer->len, sizeof(FileInfo), compare_file_info);
}

FileInfo* file_info_buffer_search(FileInfoBuffer* buffer, const char* filename) {
    if (!buffer || !filename) return NULL;

    FileInfo search_key = {.mode = 0, .name = (char*)filename};

    return (FileInfo*)list_binary_search(buffer, &search_key, compare_file_info);
}

static int is_dot_or_dotdot(const char* s) {
    return (s[0] == '.' && (s[1] == '\0' || (s[1] == '.' && s[2] == '\0')));
}

static char* join_path(const char* a, const char* b) {
    size_t la = strlen(a);
    size_t lb = strlen(b);
    int need_sep = (la > 0 && a[la - 1] != '/');

    char* s = calloc(la + (need_sep ? 1 : 0) + lb + 1, sizeof(char));
    if (!s) {
        perror("ERROR: calloc failed in join_path!");
        exit(1);
    }

    memcpy(s, a, la);
    size_t p = la;
    if (need_sep) s[p++] = '/';
    memcpy(s + p, b, lb + 1);

    return s;
}

void normalize_path(char* path, char* rel) {
    if (strlen(rel) == 0) return;

    size_t path_len = strlen(path);
    size_t rel_len = strlen(rel);
    int consumers = rel_len / 3;
    int counter = 0;
    size_t latest = 0;

    for (size_t idx = rel_len; idx < path_len; idx++) {
        if (path[idx] == '/') {
            counter++;
            latest = idx;
            if (counter == consumers) break;
        }
        if (path[idx] == '\0') break;
    }

    strcpy(path, path+latest+(counter > 0 ? 1 : 0));
}

// A function that returns the system path of the where the closest merk
// directory to the current working directory is located up in direction to
// the filesystem root
// Mutates relative in place to get the correct amount of ../ in relation to
// the directory which the software was called in
char* find_root(char* relative) {
    char* current_dir = calloc(PATH_MAX, sizeof(char));
    if (!current_dir) {
        perror("ERROR: calloc in find_root failed!");
        return NULL;
    }

    if (!getcwd(current_dir, PATH_MAX)) {
        perror("ERROR: getcwd in find_root failed!");
        free(current_dir);
        return NULL;
    }

    char* search_dir = strdup(current_dir);
    if (!search_dir) {
        perror("ERROR: strdup in find_root failed!");
        free(current_dir);
        return NULL;
    }

    while (1) {
        size_t dir_len = strlen(search_dir);
        size_t merk_path_len = dir_len + strlen("/.merk") + 1;
        char* merk_path = calloc(merk_path_len, sizeof(char));
        if (!merk_path) {
            perror("ERROR: calloc in find_root failed!");
            free(current_dir);
            free(search_dir);
            return NULL;
        }

        snprintf(merk_path, merk_path_len, "%s/.merk", search_dir);

        struct stat st;
        if (stat(merk_path, &st) == 0 && S_ISDIR(st.st_mode)) {
            free(current_dir);
            free(merk_path);
            char* result = strdup(search_dir);
            free(search_dir);
            return result;
        }

        free(merk_path);

        if (strcmp(search_dir, "/") == 0) {
            break;
        }

        char temp[PATH_MAX];
        snprintf(temp, sizeof(temp), "../%s", relative);
        strcpy(relative, temp);

        char* parent = strrchr(search_dir, '/');
        if (parent == search_dir) {
            search_dir[1] = '\0';
        } else if (parent) {
            *parent = '\0';
        } else {
            break;
        }
    }
    free(current_dir);
    free(search_dir);
    printf("ERROR: you are in no merk repository!\nCreate a new repository with merk init\n");
    return NULL;
}

void walk(char* base, char* base_rel, char* rel, FileInfoBuffer* file_infos, int full_repo_path, char* repo_root_path) {
    DIR* dir = opendir(base);
    if (!dir) {
        return;
    }

    struct dirent* de;
    while ((de = readdir(dir)) != NULL) {
        if (is_dot_or_dotdot(de->d_name)) continue;
        if (strcmp(de->d_name, ".merk") == 0) continue;

        char* child_full = join_path(base, de->d_name);
        if (!child_full) {
            perror("ERROR: memory allocation failed in walk!");
            closedir(dir);
            exit(1);
        }

        struct stat st;
        if (lstat(child_full, &st) != 0) {
            free(child_full);
            continue;
        }

        if (S_ISDIR(st.st_mode)) {
            char* new_rel;
            if (rel && rel[0]) {
                new_rel = join_path(rel, de->d_name);
            } else {
                new_rel = strdup(de->d_name);
            }

            if (!new_rel) {
                perror("ERROR: memory allocation failed in walk!");
                free(child_full);
                closedir(dir);
                exit(1);
            }

            walk(child_full, base_rel, new_rel, file_infos, full_repo_path, repo_root_path);
            free(new_rel);
        } else {
            char* relative_path;
            if (rel && rel[0]) {
                relative_path = join_path(rel, de->d_name);
            } else {
                relative_path = strdup(de->d_name);
            }

            if (!relative_path) {
                perror("ERROR: memory allocation failed in walk!");
                free(child_full);
                closedir(dir);
                exit(1);
            }

            if (!full_repo_path) {
                normalize_path(relative_path, base_rel);
                FileInfo info = (FileInfo){.mode=st.st_mode, .name=strdup(relative_path)};
                file_info_buffer_push(file_infos, info);
                free(relative_path);
            }
            else {
                char* repo_path = get_repo_path(repo_root_path, relative_path);
                FileInfo info = (FileInfo){.mode=st.st_mode, .name=strdup(repo_path)};
                file_info_buffer_push(file_infos, info);
                free(relative_path);
                free(repo_path);
            }
        }

        free(child_full);
    }

    closedir(dir);
}

// We assume that path is in the repo
char* get_repo_path(char* repo_root_path, char* path) {
    char* real_path = realpath(path, NULL);
    cut_path(repo_root_path, real_path);

    size_t len = strlen(real_path);
    if (len > 1 && real_path[len - 1] == '/') {
        real_path[len - 1] = '\0';
    }

    return real_path;
}

int is_in_repo(char* repo_root_path, char* path) {
    size_t root_len = strlen(repo_root_path);
    char* path_base = strdup(path);

    path_base[root_len] = '\0';

    int cmp = strcmp(path_base, repo_root_path);
    free(path_base);

    return cmp;
}

void visualize_diff(File* old_version, File* new_version, ActionList* actions) {
    int* deleted_lines = calloc(old_version->lines, sizeof(int));
    int* inserted_lines = calloc(new_version->lines, sizeof(int));

    if (!deleted_lines || !inserted_lines) {
        free(deleted_lines);
        free(inserted_lines);
        return;
    }

    for (uint64_t i = 0; i < actions->len; i++) {
        if (actions->actions[i].type == DELETE) {
            deleted_lines[actions->actions[i].line_original] = 1;
        } else if (actions->actions[i].type == INSERT) {
            inserted_lines[actions->actions[i].line_changed] = 1;
        }
    }

    uint64_t old_idx = 0, new_idx = 0;

    while (old_idx < old_version->lines || new_idx < new_version->lines) {
        // DELETE
        if (old_idx < old_version->lines && deleted_lines[old_idx]) {
            printf("%s%s%4ld      | %s%s\n", RED_BG, BLACK_FG, old_idx+1, old_version->content[old_idx], RESET);
            old_idx++;
        }
        // INSERT
        else if (new_idx < new_version->lines && inserted_lines[new_idx]) {
            printf("%s%s     %4ld | %s%s\n", GREEN_BG, BLACK_FG, new_idx+1, new_version->content[new_idx], RESET);
            new_idx++;
        }
        // STAYS
        else if (old_idx < old_version->lines && new_idx < new_version->lines) {
            printf("%4ld %4ld | %s\n", old_idx+1, new_idx+1, old_version->content[old_idx]);
            old_idx++;
            new_idx++;
        }
        // DELETE
        else if (old_idx < old_version->lines) {
            printf("%s%s%4ld      | %s%s\n", RED_BG, BLACK_FG, old_idx+1, old_version->content[old_idx], RESET);
            old_idx++;
        }
        // INSERT
        else if (new_idx < new_version->lines) {
            printf("%s%s     %4ld | %s%s\n", GREEN_BG, BLACK_FG, new_idx+1, new_version->content[new_idx], RESET);
            new_idx++;
        }
    }

    free(deleted_lines);
    free(inserted_lines);
}

// In this function we assume that base is a prefix of path
// Thus we just need the length of the base to jump ahead in the path
int cut_path(char* base, char* path) {
    size_t base_len = strlen(base);
    if (strlen(path) < base_len) return 0;
    int add = strlen(path) != base_len ? 1 : 0;

    strcpy(path, path+base_len+add);

    if (add) {
        char tmp[PATH_MAX];
        snprintf(tmp, sizeof(tmp), "%s/", path);
        strcpy(path, tmp);
    }

    return 1;
}

// In this function we assume that the end of the base and the beginning of the
// path are the same so we can concat them together at that part
// The path gets mutated in place
void combine_path(char* base, char* path) {
    size_t base_len = 0;

    for (size_t idx = strlen(base); idx > 0; idx--) {
        if (base[idx] == '/') {
            base_len = idx;
            break;
        }
    }

    char tmp[PATH_MAX];
    snprintf(tmp, sizeof(tmp), "%*s/%s", base_len, base, path);
    strcpy(path, tmp);
}

PathType get_path_type(const char* path) {
    struct stat st;
    int rc = stat(path, &st);
    if (rc != 0) {
        return (errno == ENOENT) ? PT_NOEXIST : PT_ERROR;
    }
    if (S_ISREG(st.st_mode))  return PT_FILE;
    if (S_ISDIR(st.st_mode))  return PT_DIR;
    return PT_OTHER;
}

char* get_file_content(char* path) {
    if (!path) return NULL;

    FILE* file = fopen(path, "rb");
    if (!file) { perror("ERROR: could not open file in get_file_content!"); return NULL; }
    if (fseek(file, 0, SEEK_END) != 0) { fclose(file); return NULL; }
    long file_size = ftell(file);
    if (file_size < 0) { perror("ERROR: file size is negative in get_file_content!"); fclose(file); return NULL; }
    if (fseek(file, 0, SEEK_SET) != 0) { fclose(file); return NULL; }
    size_t n = (size_t)file_size;
    char* buf = (char*)calloc(n + 1, 1);
    if (!buf) { fclose(file); return NULL; }

    size_t got = fread(buf, 1, n, file);
    fclose(file);

    buf[got] = '\0';

    return buf;
}

char* get_file_content_with_size(char* path, size_t* size) {
    if (!path || !size) return NULL;

    FILE* file = fopen(path, "rb");
    if (!file) { perror("ERROR: could not open file in get_file_content_with_size!"); return NULL; }
    if (fseek(file, 0, SEEK_END) != 0) { fclose(file); return NULL; }
    long file_size = ftell(file);
    if (file_size < 0) { perror("ERROR: file size is negative in get_file_content_with_size!"); fclose(file); return NULL; }
    if (fseek(file, 0, SEEK_SET) != 0) { fclose(file); return NULL; }
    size_t n = (size_t)file_size;

    char* buf = (char*)malloc(n);
    if (!buf) { fclose(file); return NULL; }

    size_t got = fread(buf, 1, n, file);
    fclose(file);

    *size = got;
    return buf;
}

// Create directory recursively
static int mkdir_recursive(const char *path, mode_t mode) {
    char *path_copy = strdup(path);
    if (!path_copy) return -1;

    char *p = path_copy;

    if (*p == '/') p++;

    while (*p) {
        while (*p && *p != '/') p++;

        char saved = *p;
        *p = '\0';

        if (mkdir(path_copy, mode) == -1 && errno != EEXIST) {
            free(path_copy);
            return -1;
        }

        *p = saved;
        if (*p) p++;
    }

    free(path_copy);
    return 0;
}

// Create default config file
int create_default_config_file(char* config_path) {
    char *dir_path = strdup(config_path);
    if (!dir_path) return -1;

    char *last_slash = strrchr(dir_path, '/');
    if (last_slash) {
        *last_slash = '\0';
        if (mkdir_recursive(dir_path, 0755) < 0) {
            perror("mkdir_recursive");
            free(dir_path);
            return -1;
        }
    }
    free(dir_path);

    FILE *fp = fopen(config_path, "w");
    if (!fp) {
        perror("fopen");
        return -1;
    }

    fprintf(fp, "[user]\n");
    fprintf(fp, "name = \"Your Name\"\n");
    fprintf(fp, "email = \"your.email@example.com\"\n");

    fclose(fp);
    return 0;
}

int save_diff(ActionList* diff, char* path, char* root, size_t diff_id, char* basefile_hash, File* modified_file, int tree, char* hash) {
    size_t buffer_size = 41;

    buffer_size += 1 + snprintf(NULL, 0, "%d", diff->len);

    for (size_t idx = 0; idx < diff->len; idx++) {
        Action action = diff->actions[idx];
        if (action.type == DELETE) {
            // 4 = OPBIT SPACE ... SPACE ... SPACE
            buffer_size +=
                4 +
                snprintf(NULL, 0, "%d", action.line_original) +
                snprintf(NULL, 0, "%d", action.line_changed);
            continue;
        }
        // 6 = OPBIT SPACE ... SPACE ... SPACE ... SPACE ... SPACE
        buffer_size +=
            6 +
            snprintf(NULL, 0, "%d", action.line_original) +
            snprintf(NULL, 0, "%d", action.line_changed) +
            snprintf(NULL, 0, "%zu", strlen(modified_file->content[action.line_changed])) +
            strlen(modified_file->content[action.line_changed]);
    }

    char tmp[buffer_size];
    size_t offset = 0;

    offset += snprintf(tmp, sizeof(tmp), "%s %zu ", basefile_hash, diff->len);

    for (size_t idx = 0; idx < diff->len; idx++) {
        Action action = diff->actions[idx];
        size_t remaining = sizeof(tmp) - offset;

        if (action.type == DELETE) {
            offset += snprintf(tmp + offset, 
                remaining, 
                "0 %zu %zu ", 
                action.line_original, 
                action.line_changed
            );
            continue;
        }

        offset += snprintf(tmp + offset, remaining, 
            "1 %zu %zu %zu %s ", 
            action.line_original, 
            action.line_changed, 
            strlen(modified_file->content[action.line_changed]), 
            modified_file->content[action.line_changed]
        );
    }

    char id[2+snprintf(NULL, 0, "%d", diff_id)+strlen(path)];
    snprintf(id, sizeof(id), "%s %d", path, diff_id);
    if (tree) object_hash(TreeDiffObject, id, hash);
    else object_hash(FileDiffObject, id, hash);

    char dir_path[PATH_MAX];
    char file_path[PATH_MAX];
    snprintf(dir_path, sizeof(dir_path), "%s/.merk/objects/%.2s", root, hash);
    mkdir(dir_path, 0755);
    snprintf(file_path, sizeof(file_path), "%s/%s", dir_path, hash+2);

    if (access(file_path, F_OK) == 0) {
        return 1;
    }

    FILE* fp = fopen(file_path, "wb");
    if (!fp) {
        perror("ERROR: cannot open path in save_diff!\n");
        return 0;
    }

    // Check if the file already exists
    

    // Ensure the directory structure exists
    if (mkdir_recursive(dir_path, 0755) < 0 && errno != EEXIST) {
        perror("ERROR: failed to create directory structure in save_diff!");
        return 0;
    }

    uLong originalLen = strlen(tmp) + 1;
    uLong compressedLen = compressBound(originalLen);
    Bytef* compressed = malloc(compressedLen);
    if (!compressed) {
        fclose(fp);
        return 0;
    }

    if (compress(compressed, &compressedLen, (const Bytef*)tmp, originalLen) != Z_OK) {
        perror("ERROR: compression failed in save_diff!");
        free(compressed);
        fclose(fp);
        return 0;
    }

    fprintf(fp, "%lu ", (unsigned long)originalLen);

    fwrite(compressed, 1, compressedLen, fp);

    fclose(fp);

    chmod(file_path, S_IRUSR | S_IRGRP | S_IROTH);

    return 1;
}

int read_diff(char* path, char* root, size_t diff_id, char* basefile_hash, ActionList* diff_out) {
    size_t compressed_size;
    unsigned char* compressed_data = (unsigned char*)get_file_content_with_size(path, &compressed_size);

    if (!compressed_data || compressed_size == 0) {
        free(compressed_data);
        return 1;
    }

    size_t idx = 0;
    while (idx < compressed_size && IS_DIGIT(compressed_data[idx])) {
        idx++;
    }

    if (idx == 0) {
        perror("ERROR: no length found at start of base file list!");
        free(compressed_data);
        return 0;
    }

    char* size_str = calloc(idx + 1, sizeof(char));
    if (!size_str) {
        free(compressed_data);
        return 0;
    }

    memcpy(size_str, compressed_data, idx);
    size_str[idx] = '\0';

    char* end;
    long original_size = strtol(size_str, &end, 10);
    if (end == size_str || *end != '\0') {
        perror("ERROR: invalid length in read_diff!");
        free(size_str);
        free(compressed_data);
        return 0;
    }
    free(size_str);

    if (idx < compressed_size && compressed_data[idx] == ' ') {
        idx++;
    }

    char* diff_list = calloc(original_size + 1, sizeof(char));
    if (!diff_list) {
        free(compressed_data);
        return 0;
    }

    uLongf dest_len = (uLongf)original_size;

    int result = uncompress((unsigned char*)diff_list, &dest_len, compressed_data + idx, compressed_size - idx);
    free(compressed_data);

    if (result != Z_OK) {
        perror("ERROR: decompression of the diff failed!");
        free(diff_list);
        return 0;
    }

    diff_list[dest_len] = '\0';

    printf("Decompressed diff content: %s\n", diff_list);

    idx = 0;
    strncpy(basefile_hash, diff_list, 40);
    basefile_hash[40] = '\0';
    idx += 41;

    while (idx < dest_len && IS_DIGIT(diff_list[idx])) {
        idx++;
    }

    if (idx == 41) {
        perror("ERROR: no length found at start of diff!");
        free(diff_list);
        return 0;
    }

    char* number_of_actions = calloc(idx + 1, sizeof(char));
    if (!number_of_actions) {
        free(diff_list);
        return 0;
    }

    memcpy(number_of_actions, diff_list + 41, idx-41);
    number_of_actions[idx] = '\0';

    long actions = strtol(number_of_actions, &end, 10);
    if (end == number_of_actions || *end != '\0') {
        perror("ERROR: invalid length in read_diff!");
        free(number_of_actions);
        free(diff_list);
        return 0;
    }
    
    free(number_of_actions);
    
    if (actions <= 0) {
        free(diff_list);
        return 1;
    }

    size_t action_idx = 0;
    while (idx < dest_len && action_idx < (size_t)actions) {
        idx++;
        
        if (diff_list[idx] == '0') {
            idx++;
            if (diff_list[idx] == ' ') idx++;
            else {
                perror("ERROR: expected space after opbit in read_diff!");
                free(diff_list);
                return 0;
            }
            size_t start_idx = idx;

            while (idx < dest_len && IS_DIGIT(diff_list[idx])) {
                idx++;
            }
            if (idx == dest_len) {
                perror("ERROR: unexpected end of diff in read_diff!");
                free(diff_list);
                return 0;
            }
            char* line_original_str = calloc(idx + 1, sizeof(char));
            if (!line_original_str) {
                free(diff_list);
                return 0;
            }
            memcpy(line_original_str, diff_list + start_idx, idx - start_idx);
            line_original_str[idx - start_idx] = '\0';
            char* end2;
            long line_original = strtol(line_original_str, &end2, 10);
            if (end2 == line_original_str || *end2 != '\0') {
                perror("ERROR: invalid line number in read_diff!");
                free(line_original_str);
                free(diff_list);
                return 0;
            }
            free(line_original_str);
            
            if (diff_list[idx] == ' ') idx++;
            else {
                perror("ERROR: expected space after line original in read_diff!");
                free(diff_list);
                return 0;
            }
            start_idx = idx;
            while (idx < dest_len && IS_DIGIT(diff_list[idx])) {
                idx++;
            }
            if (idx == dest_len) {
                perror("ERROR: unexpected end of diff in read_diff!");
                free(diff_list);
                return 0;
            }
            char* line_changed_str = calloc(idx + 1, sizeof(char));
            if (!line_changed_str) {
                free(diff_list);
                return 0;
            }
            memcpy(line_changed_str, diff_list + start_idx, idx - start_idx);
            line_changed_str[idx - start_idx] = '\0';
            long line_changed = strtol(line_changed_str, &end2, 10);
            if (end2 == line_changed_str || *end2 != '\0') {
                perror("ERROR: invalid line number in read_diff!");
                free(line_changed_str);
                free(diff_list);
                return 0;
            }
            free(line_changed_str);
            
            Action action = {.type=DELETE, .line_original=line_original, .line_changed=line_changed, .content=NULL};
            add_action(diff_out, action);
            action_idx++;
        }
        else if (diff_list[idx] == '1') {
            idx++;
            if (diff_list[idx] == ' ') idx++;
            else {
                perror("ERROR: expected space after opbit in read_diff!");
                free(diff_list);
                return 0;
            }
            size_t start_idx = idx;

            while (idx < dest_len && IS_DIGIT(diff_list[idx])) {
                idx++;
            }
            if (idx == dest_len) {
                perror("ERROR: unexpected end of diff in read_diff!");
                free(diff_list);
                return 0;
            }
            char* line_original_str = calloc(idx + 1, sizeof(char));
            if (!line_original_str) {
                free(diff_list);
                return 0;
            }
            memcpy(line_original_str, diff_list + start_idx, idx - start_idx);
            line_original_str[idx - start_idx] = '\0';
            char* end2;
            long line_original = strtol(line_original_str, &end2, 10);
            if (end2 == line_original_str || *end2 != '\0') {
                perror("ERROR: invalid line number in read_diff!");
                free(line_original_str);
                free(diff_list);
                return 0;
            }
            free(line_original_str);
            
            if (diff_list[idx] == ' ') idx++;
            else {
                perror("ERROR: expected space after line original in read_diff!");
                free(diff_list);
                return 0;
            }
            start_idx = idx;
            while (idx < dest_len && IS_DIGIT(diff_list[idx])) {
                idx++;
            }
            if (idx == dest_len) {
                perror("ERROR: unexpected end of diff in read_diff!");
                free(diff_list);
                return 0;
            }
            char* line_changed_str = calloc(idx + 1, sizeof(char));
            if (!line_changed_str) {
                free(diff_list);
                return 0;
            }
            memcpy(line_changed_str, diff_list + start_idx, idx - start_idx);
            line_changed_str[idx - start_idx] = '\0';
            long line_changed = strtol(line_changed_str, &end2, 10);
            if (end2 == line_changed_str || *end2 != '\0') {
                perror("ERROR: invalid line number in read_diff!");
                free(line_changed_str);
                free(diff_list);
                return 0;
            }
            free(line_changed_str);
            
            if (diff_list[idx] == ' ') idx++;
            else {
                perror("ERROR: expected space after line changed in read_diff!");
                free(diff_list);
                return 0;
            }

            start_idx = idx;
            while (idx < dest_len && IS_DIGIT(diff_list[idx])) {
                idx++;
            }
            if (idx == dest_len) {
                perror("ERROR: unexpected end of diff in read_diff!");
                free(diff_list);
                return 0;
            }
            char* content_len_str = calloc(idx + 1, sizeof(char));
            if (!content_len_str) {
                free(diff_list);
                return 0;
            }
            memcpy(content_len_str, diff_list + start_idx, idx - start_idx);
            content_len_str[idx - start_idx] = '\0';
            long content_len = strtol(content_len_str, &end2, 10);
            if (end2 == content_len_str || *end2 != '\0') {
                perror("ERROR: invalid line number in read_diff!");
                free(content_len_str);
                free(diff_list);
                return 0;
            }
            free(content_len_str);
            
            if (diff_list[idx] == ' ') idx++;
            else {
                perror("ERROR: expected space after line original in read_diff!");
                free(diff_list);
                return 0;
            }

            if (idx + content_len > dest_len) {
                perror("ERROR: content length exceeds diff length in read_diff!");
                free(diff_list);
                return 0;
            }

            char* content = calloc(content_len + 1, sizeof(char));
            if (!content) {
                free(diff_list);
                return 0;
            }
            memcpy(content, diff_list + idx, content_len);
            content[content_len] = '\0';

            idx += content_len;

            Action action = {.type=INSERT, .line_original=line_original, .line_changed=line_changed, .content=content};
            add_action(diff_out, action);
            action_idx++;
        }
        else {
            perror("ERROR: invalid opbit in read_diff!");
            free(diff_list);
            return 0;
        }
    }

    return 1;
}


int save_file_diff(char* path, char* root, size_t diff_id, char* basefile_hash, char* hash) {
    char basefile_location[2+strlen(root)+strlen("/.merk/objects/")+strlen(basefile_hash)];
    snprintf(basefile_location, sizeof(basefile_location), "%s/.merk/objects/%.2s/%s", root, basefile_hash, basefile_hash+2);

    size_t compressed_size;
    unsigned char* compressed_data = (unsigned char*)get_file_content_with_size(basefile_location, &compressed_size);
    if (!compressed_data) return 0;

    size_t idx = 0;

    while (idx < compressed_size && IS_DIGIT(compressed_data[idx])) {
        idx++;
    }

    if (idx == 0) {
        perror("ERROR: no length found at start of save_file_diff!");
        free(compressed_data);
        return 0;
    }

    char* size_str = calloc(idx + 1, sizeof(char));
    if (!size_str) {
        free(compressed_data);
        return 0;
    }

    memcpy(size_str, compressed_data, idx);
    size_str[idx] = '\0';

    char* end;
    long size = strtol(size_str, &end, 10);
    if (end == size_str || *end != '\0') {
        perror("ERROR: invalid length in base_file_list");
        free(size_str);
        free(compressed_data);
        return 0;
    }

    size_t offset = strlen(size_str) + 1;
    free(size_str);

    char* basefile_content = calloc(size+1, sizeof(char));
    if (!basefile_content) {
        free(compressed_data);
        return 0;
    }

    uLongf dest_len = (uLongf)size;

    int result = uncompress((unsigned char*)basefile_content, &dest_len, compressed_data+offset, compressed_size);
    free(compressed_data);

    if (result != Z_OK) {
        perror("ERROR: decompression of the base file list failed!");
        free(basefile_content);
        return 0;
    }

    basefile_content[dest_len] = '\0';

    File* basefile = from_string(basefile_content);
    char* modified_file_path = realpath(path, NULL);
    File* modified_file = new_file(modified_file_path);

    ActionList* diff = myers_diff(basefile, modified_file, 0, 0);
    if (diff->len == 0) {
        hash = NULL;
        free(basefile_content);
        return 1;
    }

    save_diff(diff, path, root, diff_id, basefile_hash, modified_file, 0, hash);

    free(basefile_content);
    return 1;
}

File* apply_diff(File* basefile, ActionList* diff) {
    if (!basefile || !diff) return NULL;

    File* copy = copy_file(basefile);
    if (!copy) return NULL;

    for (size_t i = 0; i < diff->len; i++) {
        Action* action = &diff->actions[i];
        int success = 0;

        switch (action->type) {
            case INSERT:
                success = insert_line(copy, action->content, action->line_changed);
                if (!success) {
                    fprintf(stderr, "ERROR: Failed to insert line at index %zu\n", action->line_changed);
                    free_file(copy);
                    return NULL;
                }
                break;

            case DELETE:
                success = delete_line(copy, action->line_changed);
                if (!success) {
                    fprintf(stderr, "ERROR: Failed to delete line at index %zu\n", action->line_changed);
                    free_file(copy);
                    return NULL;
                }
                break;

            default:
                fprintf(stderr, "ERROR: Unknown action type %d\n", action->type);
                free_file(copy);
                return NULL;
        }
    }

    return copy;
}

int compare_actions(const void* a, const void* b) {
    const Action* action1 = (const Action*)a;
    const Action* action2 = (const Action*)b;

    if (action1->type != action2->type) {
        return (action1->type == DELETE) ? -1 : 1;
    }

    return 0;
}

void sort_action_list(ActionList* actions) {
    if (!actions || actions->len <= 1) return;

    qsort(actions->actions, actions->len, sizeof(Action), compare_actions);
}